Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | JLT2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
581444 bp
Thymine Count
582641 bp
Guanine Count
1043056 bp
Cytosine Count
1046792 bp
Genome Length
3253933 bp
Protein-coding Genes
3044 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate lyase | C725_0947 | Not Available | Positive | 1017524 - 1019113 | 58525.9 |
| hypothetical protein | C725_0948 | Not Available | Positive | 1019157 - 1019357 | 7493.96 |
| protein ycar in kdo2-lipid a biosynthesis cluster | C725_0949 | Not Available | Negative | 1019367 - 1019618 | 9154.73 |
| hypothetical protein | C725_0950 | Not Available | Negative | 1019618 - 1020253 | 23248.7 |
| thioredoxin domain-containing protein ec-ybbn | C725_0951 | Not Available | Negative | 1020250 - 1021164 | 32664.7 |
| Trna-gly | Not Available | Not Available | Positive | 1021332 - 1021406 | Not Available |
| hypothetical protein | C725_0952 | Not Available | Negative | 1021573 - 1022727 | 41597.4 |
| uroporphyrinogen-iii synthase | C725_0953 | Not Available | Negative | 1022763 - 1023437 | 23090.9 |
| porphobilinogen deaminase | C725_0954 | Not Available | Negative | 1023434 - 1024339 | 31617.1 |
| ygjd/kae1/qri7 family, required for threonylcarbamoyladenosine (t(6)a) formation in trna | C725_0955 | Not Available | Positive | 1024400 - 1025458 | 36286.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
