Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | JLT2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
581444 bp
Thymine Count
582641 bp
Guanine Count
1043056 bp
Cytosine Count
1046792 bp
Genome Length
3253933 bp
Protein-coding Genes
3044 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative periplasmic protein yibq | C725_2898 | Not Available | Positive | 3057403 - 3058383 | 33929.2 |
| siroheme synthase | C725_2899 | Not Available | Positive | 3058399 - 3059283 | 30240.1 |
| phospholipase d family protein | C725_2900 | Not Available | Positive | 3059267 - 3060496 | 46432.1 |
| hypothetical protein | C725_2901 | Not Available | Negative | 3060656 - 3060991 | 12254.0 |
| dna polymerase i | C725_2902 | Not Available | Negative | 3061032 - 3063827 | 102699.0 |
| hypothetical protein | C725_2903 | Not Available | Negative | 3063928 - 3064341 | 14894.4 |
| peptidase, m13 family | C725_2904 | Not Available | Positive | 3064613 - 3066685 | 76440.1 |
| yrdc/sua5 family protein, required for threonylcarbamoyladenosine (t(6)a) formation in trna | C725_2905 | Not Available | Negative | 3066903 - 3067835 | 31634.9 |
| acyl-coa dehydrogenase | C725_2906 | Not Available | Positive | 3067885 - 3069651 | 62293.2 |
| rnd efflux system, outer membrane lipoprotein cmec | C725_2907 | Not Available | Negative | 3070608 - 3071900 | 45504.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
