Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | JLT2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
581444 bp
Thymine Count
582641 bp
Guanine Count
1043056 bp
Cytosine Count
1046792 bp
Genome Length
3253933 bp
Protein-coding Genes
3044 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | C725_2217 | Not Available | Negative | 2316072 - 2317688 | 58331.5 |
| hypothetical protein | C725_2218 | Not Available | Negative | 2317754 - 2319364 | 56325.6 |
| low molecular weight protein tyrosine phosphatase | C725_2219 | Not Available | Positive | 2319452 - 2319919 | 17366.4 |
| 2'-5' rna ligase | C725_2220 | Not Available | Negative | 2319913 - 2320518 | 22492.8 |
| lipolytic enzyme, g-d-s-l | C725_2221 | Not Available | Negative | 2320575 - 2321273 | 25264.6 |
| abc transporter atp-binding protein | C725_2222 | Not Available | Positive | 2321287 - 2321991 | 24164.9 |
| abc transporter, permease protein, putative | C725_2223 | Not Available | Positive | 2321988 - 2324483 | 87032.0 |
| membrane protein | C725_2224 | Not Available | Positive | 2324608 - 2325354 | 26667.2 |
| hypothetical protein | C725_2225 | Not Available | Negative | 2325484 - 2325867 | 13720.5 |
| atp-dependent clp protease atp-binding subunit clpa | C725_2226 | Not Available | Negative | 2325860 - 2328217 | 85979.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
