Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | JLT2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
581444 bp
Thymine Count
582641 bp
Guanine Count
1043056 bp
Cytosine Count
1046792 bp
Genome Length
3253933 bp
Protein-coding Genes
3044 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis chain length determinant protein | C725_2078 | Not Available | Negative | 2190074 - 2191609 | 56357.5 |
| polysaccharide export protein | C725_2079 | Not Available | Negative | 2191659 - 2192303 | 22768.4 |
| diaminopimelate decarboxylase | C725_2080 | Not Available | Negative | 2192407 - 2193678 | 44290.4 |
| long-chain-fatty-acid--coa ligase | C725_2081 | Not Available | Negative | 2193675 - 2195168 | 53461.1 |
| hypothetical protein | C725_2082 | Not Available | Negative | 2195168 - 2195797 | 22666.2 |
| hypothetical protein | C725_2083 | Not Available | Positive | 2196032 - 2196259 | 8184.77 |
| hypothetical protein | C725_2084 | Not Available | Positive | 2196295 - 2196963 | 23130.4 |
| esterase/lipase/thioesterase | C725_2085 | Not Available | Positive | 2196960 - 2197769 | 28701.2 |
| hypothetical protein | C725_2086 | Not Available | Negative | 2197770 - 2198234 | 17269.3 |
| diguanylate cyclase/phosphodiesterase (ggdef & eal domains) with pas/pac sensor(s) | C725_2087 | Not Available | Positive | 2199004 - 2201202 | 79063.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
