Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | JLT2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
581444 bp
Thymine Count
582641 bp
Guanine Count
1043056 bp
Cytosine Count
1046792 bp
Genome Length
3253933 bp
Protein-coding Genes
3044 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose 1-dehydrogenase | C725_1884 | Not Available | Negative | 1983093 - 1984037 | 33497.4 |
| dihydroxy-acid dehydratase | C725_1885 | Not Available | Positive | 1984166 - 1985971 | 64623.8 |
| transcriptional regulator of the arabinose operon in shewanella, gntr family | C725_1886 | Not Available | Negative | 1986021 - 1986770 | 27530.9 |
| sodium-dependent galactose transporter | C725_1887 | Not Available | Positive | 1986917 - 1988542 | 58368.5 |
| 2-dehydro-3-deoxygalactonokinase | C725_1888 | Not Available | Positive | 1988565 - 1989479 | 31444.8 |
| 2-dehydro-3-deoxyphosphogalactonate aldolase | C725_1889 | Not Available | Positive | 1989476 - 1990120 | 21950.5 |
| thij/pfpi family protein | C725_1890 | Not Available | Positive | 1990228 - 1990797 | 20043.4 |
| sigma factor, ecf subfamily | C725_1891 | Not Available | Positive | 1991032 - 1991583 | 20444.5 |
| putative fecr | C725_1892 | Not Available | Positive | 1991595 - 1992533 | 33785.8 |
| hypothetical protein | C725_1893 | Not Available | Negative | 1992613 - 1992774 | 5790.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
