Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | JLT2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
581444 bp
Thymine Count
582641 bp
Guanine Count
1043056 bp
Cytosine Count
1046792 bp
Genome Length
3253933 bp
Protein-coding Genes
3044 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yihy, formerly thought to be rnase bn | C725_1636 | Not Available | Negative | 1720454 - 1721350 | 32384.0 |
| dnaj-class molecular chaperone cbpa | C725_1637 | Not Available | Negative | 1721343 - 1722323 | 34489.5 |
| pyridoxamine 5'-phosphate oxidase | C725_1638 | Not Available | Positive | 1722511 - 1723113 | 22941.8 |
| cobalt-zinc-cadmium resistance protein | C725_1639 | Not Available | Positive | 1723175 - 1724092 | 32675.4 |
| hypothetical protein | C725_1640 | Not Available | Positive | 1724062 - 1724895 | 29886.0 |
| metal-dependent hydrolase | C725_1641 | Not Available | Positive | 1724913 - 1725605 | 26107.5 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | C725_1642 | Not Available | Negative | 1725623 - 1726741 | 39539.1 |
| hypothetical protein | C725_1643 | Not Available | Positive | 1726975 - 1727208 | 8833.65 |
| chorismate synthase | C725_1644 | Not Available | Positive | 1727280 - 1728350 | 37753.6 |
| sam-dependent methyltransferase | C725_1645 | Not Available | Positive | 1728373 - 1729440 | 38533.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
