Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | JLT2015 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
581444 bp
Thymine Count
582641 bp
Guanine Count
1043056 bp
Cytosine Count
1046792 bp
Genome Length
3253933 bp
Protein-coding Genes
3044 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii/iv secretion system protein tadc, associated with flp pilus assembly | C725_1125 | Not Available | Negative | 1185564 - 1186559 | 36024.9 |
| flp pilus assembly protein tadb | C725_1126 | Not Available | Negative | 1186572 - 1187549 | 35239.8 |
| type ii/iv secretion system atp hydrolase tada/virb11/cpaf, tada subfamily | C725_1127 | Not Available | Negative | 1187546 - 1189234 | 61214.0 |
| type ii/iv secretion system atpase tadz/cpae, associated with flp pilus assembly | C725_1128 | Not Available | Negative | 1189341 - 1190609 | 44283.3 |
| hypothetical protein | C725_1129 | Not Available | Negative | 1190623 - 1191267 | 22188.1 |
| type ii/iv secretion system secretin rcpa/cpac, associated with flp pilus assembly | C725_1130 | Not Available | Negative | 1191291 - 1192760 | 51781.6 |
| flp pilus assembly protein rcpc/cpab | C725_1131 | Not Available | Negative | 1192765 - 1193877 | 38380.6 |
| type iv prepilin peptidase tadv/cpaa | C725_1132 | Not Available | Negative | 1193916 - 1194413 | 17830.4 |
| lysophospholipase l2 | C725_1133 | Not Available | Positive | 1194496 - 1195416 | 33934.9 |
| fad dependent oxidoreductase | C725_1134 | Not Available | Positive | 1195430 - 1196542 | 38707.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
