Chitinophaga solisilvae

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga solisilvae is a Gram-negative bacterium characterized by its rod-shaped morphology. It is classified under the genus Chitinophaga, which is known for its role in the degradation of chitin, a biopolymer found in the exoskeletons of arthropods and fungal cell walls. Chitinophaga solisilvae possesses a single replicon, indicating a simple genomic structure which may facilitate its adaptability in various environments. This bacterium has been cataloged with the accession number RIAR00000000.2, providing a reference for further genomic and taxonomic studies. The ability of Chitinophaga solisilvae to decompose chitin suggests it plays a significant role in nutrient cycling within its ecosystem, particularly in environments rich in organic matter derived from chitin-containing organisms. The ecological implications of Chitinophaga solisilvae's chitinolytic activity are noteworthy, as it may contribute to soil health and fertility by breaking down complex organic materials, thus recycling nutrients. This process can enhance the availability of nitrogen and other essential elements for plant growth, linking microbial activity to broader ecological dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga solisilvae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga solisilvae 8, whole genome shotgun sequence.

Gene Summary

Adenine Count

2096669 bp

Thymine Count

2067295 bp

Guanine Count

1962512 bp

Cytosine Count

1953231 bp

Genome Length

8079707 bp

Protein-coding Genes

5974 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
comf family proteinECE50_022235Not AvailableNegative5995659 - 599634525250.4
zinc metallopeptidaseECE50_022245Not AvailablePositive5998311 - 599899724894.4
50s ribosomal protein l13ECE50_022250Not AvailablePositive5999287 - 599973016765.6
30s ribosomal protein s9ECE50_022255Not AvailablePositive5999745 - 600013414448.7
30s ribosomal protein s2ECE50_022260Not AvailablePositive6000197 - 600119235198.0
elongation factor tsECE50_022265Not AvailablePositive6001345 - 600216929352.3
ump kinaseECE50_022270Not AvailablePositive6002339 - 600305226052.8
duf3298 domain-containing proteinECE50_022275Not AvailableNegative6003172 - 600428141456.4
pyridoxamine 5'-phosphate oxidaseECE50_022280Not AvailablePositive6004369 - 600501624689.1
30s ribosomal protein thxECE50_022285Not AvailableNegative6005153 - 60052724252.28

Displaying genes 4421 – 4430 of 6041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.