Chitinophaga solisilvae

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga solisilvae is a Gram-negative bacterium characterized by its rod-shaped morphology. It is classified under the genus Chitinophaga, which is known for its role in the degradation of chitin, a biopolymer found in the exoskeletons of arthropods and fungal cell walls. Chitinophaga solisilvae possesses a single replicon, indicating a simple genomic structure which may facilitate its adaptability in various environments. This bacterium has been cataloged with the accession number RIAR00000000.2, providing a reference for further genomic and taxonomic studies. The ability of Chitinophaga solisilvae to decompose chitin suggests it plays a significant role in nutrient cycling within its ecosystem, particularly in environments rich in organic matter derived from chitin-containing organisms. The ecological implications of Chitinophaga solisilvae's chitinolytic activity are noteworthy, as it may contribute to soil health and fertility by breaking down complex organic materials, thus recycling nutrients. This process can enhance the availability of nitrogen and other essential elements for plant growth, linking microbial activity to broader ecological dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga solisilvae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga solisilvae 8, whole genome shotgun sequence.

Gene Summary

Adenine Count

2096669 bp

Thymine Count

2067295 bp

Guanine Count

1962512 bp

Cytosine Count

1953231 bp

Genome Length

8079707 bp

Protein-coding Genes

5974 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcECE50_016875Not AvailableNegative4669999 - 467120743582.9
dna-directed rna polymerase subunit omegaECE50_016880Not AvailableNegative4671326 - 467166713202.4
outer membrane protein assembly factor bamdECE50_016885Not AvailableNegative4671636 - 467246632642.7
division/cell wall cluster transcriptional repressor mrazECE50_016890Not AvailablePositive4672905 - 467337217459.9
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhECE50_016895Not AvailablePositive4673383 - 467429434166.1
hypothetical proteinECE50_016900Not AvailablePositive4674414 - 467477614050.2
transpeptidase family proteinECE50_016905Not AvailablePositive4674964 - 467706977885.3
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseECE50_016910Not AvailablePositive4677070 - 467853653348.3
phospho-n-acetylmuramoyl-pentapeptide- transferaseECE50_016915Not AvailablePositive4678620 - 467987946849.9
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseECE50_016920Not AvailablePositive4679914 - 468125449494.8

Displaying genes 3351 – 3360 of 6041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.