Halogeometricum pallidum JCM 14848

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halogeometricum

Description

Halogeometricum pallidum JCM 14848 is a Gram-negative archaeon characterized by the presence of flagella, which facilitate motility. This organism possesses a single replicon, indicating a simplified genomic structure that is typical for certain archaeal species. The genomic data for Halogeometricum pallidum can be accessed under the accession number AOIV00000000.1. As a member of the Halogeometricum genus, Halogeometricum pallidum is likely adapted to extreme saline environments, which are characteristic of many halophilic archaeal species. The presence of flagella suggests that this organism may utilize motility to navigate its saline habitat, potentially allowing it to optimize its exposure to nutrients or escape unfavorable conditions. The specific ecological role of Halogeometricum pallidum within its environment is not detailed in the available data, but its traits suggest it may play a part in biogeochemical cycles in hypersaline ecosystems. This could involve interactions with other microorganisms and the contribution to the microbial community structure in such extreme environments. Understanding the biology and ecological interactions of Halogeometricum pallidum may provide insights into the adaptability of life in extreme conditions and the evolutionary significance of motility in archaea.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalogeometricum
SpeciesHalogeometricum pallidum
StrainJCM 14848

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halogeometricum pallidum JCM 14848 contig_45, whole genome shotgun

Gene Summary

Adenine Count

746585 bp

Thymine Count

759644 bp

Guanine Count

1431049 bp

Cytosine Count

1447124 bp

Genome Length

4384515 bp

Protein-coding Genes

4239 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
htr-like proteinC474_09022Not AvailableNegative1815895 - 181695039560.9
pas domain s-boxC474_09027Not AvailableNegative1816990 - 181836651681.5
methyl-accepting chemotaxis proteinC474_09032Not AvailableNegative1818600 - 1821554105312.0
d-isomer specific 2-hydroxyacid dehydrogenase nad-binding proteinC474_09037Not AvailableNegative1822885 - 182382934870.5
hypothetical proteinC474_09042Not AvailablePositive1824161 - 182491328059.8
pkd domain containing proteinC474_09047Not AvailablePositive1826200 - 182814366759.8
hypothetical proteinC474_09052Not AvailablePositive1828684 - 182954130646.2
pas/pac sensor signal transduction histidine kinaseC474_09057Not AvailableNegative1829653 - 183106853022.9
nucleoside-diphosphate-sugar epimerase (udp-glucose 4-epimerase)C474_09062Not AvailableNegative1831265 - 183218233968.1
transposase, is605 orfb family proteinC474_09067Not AvailableNegative1832388 - 183370750446.3

Displaying genes 1801 – 1810 of 4300 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.