Halorubrum distributum JCM 10118

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum distributum JCM 10118 is a rod-shaped archaeon notable for its presence of flagella, which facilitate motility in its environment. This microorganism is classified within the domain Archaea and is known for thriving in extreme saline conditions, characteristic of many members of the Halorubrum genus. The genome of Halorubrum distributum contains a single replicon, indicating a streamlined genetic organization that is often associated with extremophiles. This single-replicon structure may contribute to efficient replication and adaptation mechanisms, allowing the organism to maintain functionality in harsh environments. The accession number for Halorubrum distributum is AOJN00000000.1, which provides a reference for researchers seeking genomic data for further study. This information can be invaluable for understanding the genetic basis of its adaptability and survival strategies in high-salinity habitats. From an ecological perspective, Halorubrum distributum plays a crucial role in the microbial communities found in saline environments. Its ability to thrive in such conditions contributes to the overall biodiversity and functional dynamics of these ecosystems. As a motile organism, it may interact with other microbial populations, influencing nutrient cycling and energy flow within its niche. The presence of flagella suggests potential for competitive advantage in these environments, emphasizing the importance of mobility in the survival and ecological interactions of extremophilic microorganisms.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum distributum
StrainJCM 10118

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum distributum JCM 10118 contig_68, whole genome shotgun

Gene Summary

Adenine Count

525331 bp

Thymine Count

529877 bp

Guanine Count

1123525 bp

Cytosine Count

1127277 bp

Genome Length

3306135 bp

Protein-coding Genes

3123 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, trmbC466_13375Not AvailablePositive2774543 - 277534929200.1
pas/pac sensor signal transduction histidine kinaseC466_13380Not AvailablePositive2775512 - 277725462500.9
ribosomal-protein-alanine acetyltransferaseC466_13385Not AvailablePositive2777299 - 277786820075.3
oligoendopeptidase fC466_13390Not AvailablePositive2777942 - 277974167690.2
hypothetical proteinC466_13395Not AvailablePositive2779810 - 278029216798.2
hypothetical proteinC466_13400Not AvailablePositive2780386 - 278119831058.9
peptidase m29 aminopeptidase iiC466_13405Not AvailablePositive2781319 - 278245841064.8
o-acetylhomoserine/o-acetylserine sulfhydrylaseC466_13410Not AvailableNegative2782997 - 278430146412.0
band 7 proteinC466_13415Not AvailablePositive2784478 - 278569844625.2
ribonucleotide-diphosphate reductase subunit alphaC466_13420Not AvailableNegative2785819 - 278750764118.1

Displaying genes 2681 – 2690 of 3169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.