Halorubrum distributum JCM 10118

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum distributum JCM 10118 is a rod-shaped archaeon notable for its presence of flagella, which facilitate motility in its environment. This microorganism is classified within the domain Archaea and is known for thriving in extreme saline conditions, characteristic of many members of the Halorubrum genus. The genome of Halorubrum distributum contains a single replicon, indicating a streamlined genetic organization that is often associated with extremophiles. This single-replicon structure may contribute to efficient replication and adaptation mechanisms, allowing the organism to maintain functionality in harsh environments. The accession number for Halorubrum distributum is AOJN00000000.1, which provides a reference for researchers seeking genomic data for further study. This information can be invaluable for understanding the genetic basis of its adaptability and survival strategies in high-salinity habitats. From an ecological perspective, Halorubrum distributum plays a crucial role in the microbial communities found in saline environments. Its ability to thrive in such conditions contributes to the overall biodiversity and functional dynamics of these ecosystems. As a motile organism, it may interact with other microbial populations, influencing nutrient cycling and energy flow within its niche. The presence of flagella suggests potential for competitive advantage in these environments, emphasizing the importance of mobility in the survival and ecological interactions of extremophilic microorganisms.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum distributum
StrainJCM 10118

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum distributum JCM 10118 contig_68, whole genome shotgun

Gene Summary

Adenine Count

525331 bp

Thymine Count

529877 bp

Guanine Count

1123525 bp

Cytosine Count

1127277 bp

Genome Length

3306135 bp

Protein-coding Genes

3123 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC466_13080Not AvailablePositive2697238 - 269802327046.7
cell division inhibitor mind-like (chromosome partitioning atpase)C466_13085Not AvailablePositive2698020 - 269867021729.0
peptidaseC466_13090Not AvailablePositive2698765 - 269945123560.8
hypothetical proteinC466_13095Not AvailableNegative2699508 - 269980710197.7
phenylalanyl-trna ligase subunit alphaC466_13100Not AvailablePositive2699930 - 270146555499.0
phenylalanyl-trna ligase subunit betaC466_13105Not AvailablePositive2701465 - 270320163705.4
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolaseC466_13110Not AvailableNegative2703519 - 270415721173.8
galactonate dehydrataseC466_13115Not AvailablePositive2704381 - 270553242125.3
short-chain dehydrogenase/reductase sdrC466_13120Not AvailablePositive2705573 - 270640329180.8
pfkb domain proteinC466_13125Not AvailablePositive2706546 - 270751134507.0

Displaying genes 2621 – 2630 of 3169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.