Halorubrum distributum JCM 10118

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum distributum JCM 10118 is a rod-shaped archaeon notable for its presence of flagella, which facilitate motility in its environment. This microorganism is classified within the domain Archaea and is known for thriving in extreme saline conditions, characteristic of many members of the Halorubrum genus. The genome of Halorubrum distributum contains a single replicon, indicating a streamlined genetic organization that is often associated with extremophiles. This single-replicon structure may contribute to efficient replication and adaptation mechanisms, allowing the organism to maintain functionality in harsh environments. The accession number for Halorubrum distributum is AOJN00000000.1, which provides a reference for researchers seeking genomic data for further study. This information can be invaluable for understanding the genetic basis of its adaptability and survival strategies in high-salinity habitats. From an ecological perspective, Halorubrum distributum plays a crucial role in the microbial communities found in saline environments. Its ability to thrive in such conditions contributes to the overall biodiversity and functional dynamics of these ecosystems. As a motile organism, it may interact with other microbial populations, influencing nutrient cycling and energy flow within its niche. The presence of flagella suggests potential for competitive advantage in these environments, emphasizing the importance of mobility in the survival and ecological interactions of extremophilic microorganisms.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum distributum
StrainJCM 10118

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum distributum JCM 10118 contig_68, whole genome shotgun

Gene Summary

Adenine Count

525331 bp

Thymine Count

529877 bp

Guanine Count

1123525 bp

Cytosine Count

1127277 bp

Genome Length

3306135 bp

Protein-coding Genes

3123 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha amylase catalytic regionC466_05987Not AvailablePositive1227408 - 122975984474.9
transcriptional regulator, trmbC466_05992Not AvailablePositive1229845 - 123090638292.9
hypothetical proteinC466_05997Not AvailableNegative1231057 - 123211236536.7
thioredoxin reductase-like proteinC466_06002Not AvailableNegative1232137 - 123296729108.3
hypothetical proteinC466_06007Not AvailableNegative1233143 - 12333196520.53
hypothetical proteinC466_06012Not AvailableNegative1233320 - 123456145157.6
abc transporterC466_06017Not AvailableNegative1234652 - 123558132602.9
transporter permeaseC466_06022Not AvailableNegative1235582 - 123679942101.1
thioredoxin reductaseC466_06027Not AvailableNegative1236834 - 123783835627.1
ferrichrome-binding proteinC466_06032Not AvailableNegative1237835 - 123909145114.3

Displaying genes 1201 – 1210 of 3169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.