Halorubrum distributum JCM 10118

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum distributum JCM 10118 is a rod-shaped archaeon notable for its presence of flagella, which facilitate motility in its environment. This microorganism is classified within the domain Archaea and is known for thriving in extreme saline conditions, characteristic of many members of the Halorubrum genus. The genome of Halorubrum distributum contains a single replicon, indicating a streamlined genetic organization that is often associated with extremophiles. This single-replicon structure may contribute to efficient replication and adaptation mechanisms, allowing the organism to maintain functionality in harsh environments. The accession number for Halorubrum distributum is AOJN00000000.1, which provides a reference for researchers seeking genomic data for further study. This information can be invaluable for understanding the genetic basis of its adaptability and survival strategies in high-salinity habitats. From an ecological perspective, Halorubrum distributum plays a crucial role in the microbial communities found in saline environments. Its ability to thrive in such conditions contributes to the overall biodiversity and functional dynamics of these ecosystems. As a motile organism, it may interact with other microbial populations, influencing nutrient cycling and energy flow within its niche. The presence of flagella suggests potential for competitive advantage in these environments, emphasizing the importance of mobility in the survival and ecological interactions of extremophilic microorganisms.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum distributum
StrainJCM 10118

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum distributum JCM 10118 contig_68, whole genome shotgun

Gene Summary

Adenine Count

525331 bp

Thymine Count

529877 bp

Guanine Count

1123525 bp

Cytosine Count

1127277 bp

Genome Length

3306135 bp

Protein-coding Genes

3123 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxidoreductase molybdopterin binding proteinC466_05793Not AvailablePositive1182095 - 118270922828.0
isochorismate synthaseC466_05798Not AvailablePositive1182810 - 118418949451.1
hypothetical proteinC466_05803Not AvailableNegative1184217 - 118495725962.4
rna methylase, nol1/nop2/sun family proteinC466_05808Not AvailablePositive1185081 - 118601033784.0
hypothetical proteinC466_05813Not AvailablePositive1186007 - 118653719579.5
phosphoesterase recj domain proteinC466_05818Not AvailablePositive1186602 - 118763336888.1
hypothetical proteinC466_05823Not AvailableNegative1187786 - 118930355508.8
phosphomethylpyrimidine synthase thicC466_05828Not AvailableNegative1189409 - 119084551696.9
histone acetyltransferase, elp3 family proteinC466_05833Not AvailablePositive1190972 - 119270264486.1
peptidase s8 and s53 subtilisin kexin sedolisinC466_05838Not AvailablePositive1192899 - 119422744886.6

Displaying genes 1161 – 1170 of 3169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.