Halorubrum distributum JCM 9100

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum distributum JCM 9100 is a halophilic archaeon characterized by its rod-shaped morphology and the presence of flagella, which likely facilitates motility in saline environments. This organism possesses a single replicon, indicating a streamlined genomic architecture that is typical among certain archaeal species. The genomic data for Halorubrum distributum is available under the accession number AOJM00000000.1, providing a resource for further genetic and functional studies. As a member of the Halorubrum genus, Halorubrum distributum thrives in high-salinity conditions, which are often found in environments such as salt flats and hypersaline lakes. The adaptations that allow for survival in these extreme conditions may include unique biochemical pathways and cellular mechanisms that confer osmotic balance and stability. The presence of flagella not only suggests motility but may also play a role in nutrient acquisition in such challenging habitats. Understanding the ecological role of Halorubrum distributum can shed light on the functioning of microbial communities in hypersaline ecosystems. As a halophilic archaeon, it likely contributes to biogeochemical cycles, particularly in the degradation of organic material and the cycling of nutrients within these unique environments. The study of Halorubrum distributum and similar extremophiles is essential for comprehending how life adapts to extreme conditions, with potential implications for biotechnology and astrobiology.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum distributum
StrainJCM 9100

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum distributum JCM 9100 contig_83, whole genome shotgun

Gene Summary

Adenine Count

529423 bp

Thymine Count

526409 bp

Guanine Count

1127323 bp

Cytosine Count

1124075 bp

Genome Length

3307369 bp

Protein-coding Genes

3133 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
orc1/cdc6 family replication initiation proteinC465_15052Not AvailableNegative3118122 - 312006571034.8
crotonobetainyl-coa:carnitine coa-transferase/alpha-methylacyl-coa racemaseC465_15057Not AvailablePositive3120967 - 312231048886.2
acetyl-coa c-acyltransferaseC465_15062Not AvailablePositive3122300 - 312346339732.2
hypothetical proteinC465_15067Not AvailablePositive3123460 - 312385214011.1
transcription regulatorC465_15072Not AvailableNegative3123907 - 312464127607.4
hypothetical proteinC465_15077Not AvailablePositive3124760 - 312611548799.8
5-carboxymethyl-2-hydroxymuconate delta-isomeraseC465_15082Not AvailablePositive3126146 - 312703031874.5
hypothetical proteinC465_15087Not AvailablePositive3127156 - 31274288939.07
dna polymerase beta domain protein regionC465_15092Not AvailablePositive3128158 - 312874522025.9
hypothetical proteinC465_15097Not AvailablePositive3128738 - 312922618579.9

Displaying genes 3011 – 3020 of 3180 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.