Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum californiense |
| Strain | DSM 19288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
622251 bp
Thymine Count
622914 bp
Guanine Count
1214678 bp
Cytosine Count
1222823 bp
Genome Length
3682872 bp
Protein-coding Genes
3456 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pua domain containing protein | C463_01136 | Not Available | Negative | 232613 - 233122 | 17601.2 |
| hypothetical protein | C463_01141 | Not Available | Negative | 233188 - 237015 | 134232.0 |
| acetaldehyde dehydrogenase (acetylating) nad-dependent | C463_01146 | Not Available | Positive | 237133 - 238677 | 51156.8 |
| metal dependent phosphohydrolase | C463_01151 | Not Available | Negative | 238708 - 239625 | 33409.5 |
| haloacid dehalogenase | C463_01156 | Not Available | Positive | 239784 - 240467 | 24814.6 |
| dihydrodipicolinate synthase | C463_01161 | Not Available | Positive | 240743 - 241744 | 35398.9 |
| dihydrodipicolinate reductase | C463_01166 | Not Available | Positive | 241741 - 242544 | 27671.6 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | C463_01171 | Not Available | Positive | 242602 - 243441 | 29975.8 |
| diaminopimelate decarboxylase | C463_01176 | Not Available | Positive | 243438 - 244826 | 48441.9 |
| diaminopimelate epimerase | C463_01181 | Not Available | Positive | 244823 - 245773 | 32591.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
