Halorubrum californiense DSM 19288

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum californiense DSM 19288 is a rod-shaped archaeon, characterized by its motility due to the presence of flagella. This structural feature enables the organism to navigate its environment, which is particularly significant in its natural habitats, often characterized by extreme saline conditions. The genome of Halorubrum californiense contains a single replicon, which is a defining characteristic of many archaeal species. This may influence its replication and genetic stability, allowing it to thrive in challenging environments. The organism is cataloged under the accession number AOJK00000000.1, which provides a reference for researchers seeking genomic information. In terms of ecological insight, Halorubrum californiense's adaptation to high-salinity environments underscores the versatility of archaeal life forms. Its motility, coupled with its genomic characteristics, suggests a competitive advantage in niche environments where resources may be limited. This adaptability may also play a role in its interactions with other microbial communities, contributing to the overall dynamics of extreme saline ecosystems. Understanding such traits can enhance our knowledge of microbial ecology and the evolutionary strategies employed by extremophiles.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum californiense
StrainDSM 19288

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum californiense DSM 19288 contig_83, whole genome shotgun

Gene Summary

Adenine Count

622251 bp

Thymine Count

622914 bp

Guanine Count

1214678 bp

Cytosine Count

1222823 bp

Genome Length

3682872 bp

Protein-coding Genes

3456 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate abc transporter permeaseC463_09559Not AvailablePositive1960975 - 196194933972.9
phosphate abc transporter permeaseC463_09564Not AvailablePositive1961949 - 196371560134.5
phosphate abc transporter atp-binding proteinC463_09569Not AvailablePositive1963717 - 196455030247.4
phosphate uptake regulator, phouC463_09574Not AvailablePositive1964551 - 196525225118.9
na+/ca2+-exchanging proteinC463_09579Not AvailablePositive1965421 - 196649137068.0
glyoxalase/bleomycin resistance protein/dioxygenaseC463_09584Not AvailableNegative1966539 - 196747132819.8
cobalamin b12-binding domain proteinC463_09589Not AvailablePositive1967600 - 196801915021.8
lao/ao transporter atpaseC463_09594Not AvailablePositive1968020 - 196920740705.8
alpha/beta hydrolase fold proteinC463_09599Not AvailablePositive1969284 - 197023733885.3
htr-like proteinC463_09604Not AvailablePositive1970307 - 197107427922.3

Displaying genes 1901 – 1910 of 3502 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.