Halorubrum californiense DSM 19288

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum californiense DSM 19288 is a rod-shaped archaeon, characterized by its motility due to the presence of flagella. This structural feature enables the organism to navigate its environment, which is particularly significant in its natural habitats, often characterized by extreme saline conditions. The genome of Halorubrum californiense contains a single replicon, which is a defining characteristic of many archaeal species. This may influence its replication and genetic stability, allowing it to thrive in challenging environments. The organism is cataloged under the accession number AOJK00000000.1, which provides a reference for researchers seeking genomic information. In terms of ecological insight, Halorubrum californiense's adaptation to high-salinity environments underscores the versatility of archaeal life forms. Its motility, coupled with its genomic characteristics, suggests a competitive advantage in niche environments where resources may be limited. This adaptability may also play a role in its interactions with other microbial communities, contributing to the overall dynamics of extreme saline ecosystems. Understanding such traits can enhance our knowledge of microbial ecology and the evolutionary strategies employed by extremophiles.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum californiense
StrainDSM 19288

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum californiense DSM 19288 contig_83, whole genome shotgun

Gene Summary

Adenine Count

622251 bp

Thymine Count

622914 bp

Guanine Count

1214678 bp

Cytosine Count

1222823 bp

Genome Length

3682872 bp

Protein-coding Genes

3456 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coa-binding proteinC463_08249Not AvailablePositive1693180 - 169360215017.5
pyridoxal-5'-phosphate-dependent protein subunit betaC463_08254Not AvailableNegative1693630 - 169461035106.8
threonyl-trna ligaseC463_08259Not AvailablePositive1694824 - 169680075013.4
multi-sensor signal transduction histidine kinaseC463_08264Not AvailableNegative1696840 - 169836056570.0
aminotransferase class vC463_08269Not AvailablePositive1698640 - 169980642576.0
imp dehydrogenase/gmp reductaseC463_08274Not AvailablePositive1699886 - 170099537689.6
hypothetical proteinC463_08279Not AvailablePositive1701116 - 170183526235.4
major facilitator superfamily mfs_1C463_08284Not AvailableNegative1701881 - 170264226150.9
hypothetical proteinC463_08289Not AvailablePositive1702780 - 17029897244.0
hypothetical proteinC463_08294Not AvailablePositive1703154 - 17032824366.0

Displaying genes 1641 – 1650 of 3502 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.