Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum californiense |
| Strain | DSM 19288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
622251 bp
Thymine Count
622914 bp
Guanine Count
1214678 bp
Cytosine Count
1222823 bp
Genome Length
3682872 bp
Protein-coding Genes
3456 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | C463_07642 | Not Available | Negative | 1559420 - 1562476 | 111907.0 |
| cytidylate kinase | C463_07647 | Not Available | Positive | 1562613 - 1563227 | 22754.4 |
| methylated-dna--protein-cysteine methyltransferase | C463_07652 | Not Available | Negative | 1563261 - 1563725 | 16333.9 |
| indole-3-glycerol phosphate synthase | C463_07657 | Not Available | Positive | 1563869 - 1564708 | 29250.9 |
| tryptophan synthase subunit beta | C463_07662 | Not Available | Positive | 1564705 - 1566003 | 47068.8 |
| tryptophan synthase subunit alpha | C463_07667 | Not Available | Positive | 1566004 - 1566858 | 30239.1 |
| fructose-bisphosphate aldolase | C463_07672 | Not Available | Positive | 1566939 - 1567730 | 27241.6 |
| httm domain protein | C463_07677 | Not Available | Negative | 1567751 - 1569250 | 53185.9 |
| 3-dehydroquinate synthase | C463_07682 | Not Available | Positive | 1569374 - 1570546 | 42121.3 |
| hypothetical protein | C463_07687 | Not Available | Positive | 1570645 - 1571262 | 21431.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
