Halobiforma nitratireducens JCM 10879

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halobiforma

Description

Halobiforma nitratireducens JCM 10879 is a notable microorganism characterized by its unique metabolic capabilities, particularly its ability to reduce nitrate. This strain is classified within a single replicon, indicating a streamlined genomic structure conducive to its ecological roles. The genomic data for Halobiforma nitratireducens is available under the accession number AOMA00000000.1. This organism's capacity for nitrate reduction suggests its potential importance in biogeochemical cycles, particularly in saline environments where it may contribute to nitrogen cycling processes. By reducing nitrate, Halobiforma nitratireducens may play a role in the dynamics of nitrogen availability and the overall health of the ecosystems it inhabits. Its presence could influence the microbial community structure and function, particularly in environments where nitrate is a limiting nutrient. Overall, Halobiforma nitratireducens JCM 10879 exemplifies how specific microbial traits can impact ecological processes, emphasizing the importance of understanding microbial metabolism in environmental microbiology.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalobiforma
SpeciesHalobiforma nitratireducens
StrainJCM 10879

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halobiforma nitratireducens JCM 10879 contig_205, whole genome

Gene Summary

Adenine Count

668953 bp

Thymine Count

669099 bp

Guanine Count

1177184 bp

Cytosine Count

1173359 bp

Genome Length

3688747 bp

Protein-coding Genes

3531 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ketol-acid reductoisomeraseC446_12889Not AvailablePositive2635012 - 263606138089.5
isopropylmalate isomerase large subunitC446_12894Not AvailablePositive2636502 - 263792351692.1
3-isopropylmalate dehydratase small subunitC446_12899Not AvailablePositive2637923 - 263857023234.6
hypothetical proteinC446_12904Not AvailablePositive2638965 - 26391897612.3
peptidase s8 and s53 subtilisin kexin sedolisinC446_12909Not AvailablePositive2639290 - 264168681384.6
3-isopropylmalate dehydrogenaseC446_12914Not AvailablePositive2641770 - 264275034021.4
alpha/beta hydrolase fold proteinC446_12919Not AvailablePositive2642807 - 264388038467.0
diphthine synthaseC446_12924Not AvailableNegative2643916 - 264470428389.2
transcription regulator sirrC446_12929Not AvailablePositive2644909 - 264559525593.7
zinc transporterC446_12934Not AvailablePositive2645762 - 264669432452.6

Displaying genes 2541 – 2550 of 3578 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.