Thalassobacter sp. 16PALIMAR09

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Thalassobacter

Description

Thalassobacter sp. 16PALIMAR09 is a marine bacterium characterized by a single replicon, indicating a streamlined genomic organization. Its accession number is JHAK00000000.1, which serves as a reference for genomic data associated with this organism. While specific functional traits and ecological roles of Thalassobacter sp. 16PALIMAR09 are not detailed in the available evidence, the genus Thalassobacter is known to inhabit marine environments, suggesting that this bacterium may play a role in nutrient cycling and interactions within its ecosystem. Marine bacteria often contribute to the degradation of organic matter and can influence the availability of nutrients for higher trophic levels in marine food webs. The presence of a single replicon may also suggest a certain genomic stability and efficiency in replication, which can be advantageous for survival in dynamic marine habitats. Understanding the genomic characteristics of Thalassobacter sp. 16PALIMAR09 could provide valuable insights into its ecological functions and potential applications in biotechnology, particularly in marine bioremediation or bioengineering. In summary, Thalassobacter sp. 16PALIMAR09, with its single replicon and marine habitat, may contribute to the ecological balance of marine ecosystems, although further research is necessary to elucidate its specific biological roles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusThalassobacter
SpeciesThalassobacter sp. 16PALIMAR09
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassobacter sp. 16PALIMAR09 PM04_039, whole genome shotgun

Gene Summary

Adenine Count

712909 bp

Thymine Count

740935 bp

Guanine Count

1065415 bp

Cytosine Count

1012609 bp

Genome Length

3531868 bp

Protein-coding Genes

3298 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c4-dicarboxylate abc transporterPM04_16475Not AvailableNegative3342353 - 334368148316.9
c4-dicarboxylate abc transporterPM04_16480Not AvailableNegative3343681 - 334425321620.0
n-formylglutamate amidohydrolasePM04_16485Not AvailableNegative3344241 - 334502028054.1
rpir family transcriptional regulatorPM04_16490Not AvailablePositive3345141 - 334601332915.3
spermidine/putrescine abc transporter substrate-binding proteinPM04_16495Not AvailablePositive3346121 - 334718238026.5
spermidine/putrescine abc transporter atp-binding proteinPM04_16500Not AvailablePositive3347252 - 334836440231.4
spermidine/putrescine abc transporter permeasePM04_16505Not AvailablePositive3348361 - 334922731641.8
abc transporter permeasePM04_16510Not AvailablePositive3349224 - 335007830848.3
hypothetical proteinPM04_16515Not AvailablePositive3350100 - 33503188192.98
hypothetical proteinPM04_16520Not AvailableNegative3350791 - 33509887698.68

Displaying genes 3201 – 3210 of 3396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.