Thalassobacter sp. 16PALIMAR09

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Thalassobacter

Description

Thalassobacter sp. 16PALIMAR09 is a marine bacterium characterized by a single replicon, indicating a streamlined genomic organization. Its accession number is JHAK00000000.1, which serves as a reference for genomic data associated with this organism. While specific functional traits and ecological roles of Thalassobacter sp. 16PALIMAR09 are not detailed in the available evidence, the genus Thalassobacter is known to inhabit marine environments, suggesting that this bacterium may play a role in nutrient cycling and interactions within its ecosystem. Marine bacteria often contribute to the degradation of organic matter and can influence the availability of nutrients for higher trophic levels in marine food webs. The presence of a single replicon may also suggest a certain genomic stability and efficiency in replication, which can be advantageous for survival in dynamic marine habitats. Understanding the genomic characteristics of Thalassobacter sp. 16PALIMAR09 could provide valuable insights into its ecological functions and potential applications in biotechnology, particularly in marine bioremediation or bioengineering. In summary, Thalassobacter sp. 16PALIMAR09, with its single replicon and marine habitat, may contribute to the ecological balance of marine ecosystems, although further research is necessary to elucidate its specific biological roles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusThalassobacter
SpeciesThalassobacter sp. 16PALIMAR09
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassobacter sp. 16PALIMAR09 PM04_039, whole genome shotgun

Gene Summary

Adenine Count

712909 bp

Thymine Count

740935 bp

Guanine Count

1065415 bp

Cytosine Count

1012609 bp

Genome Length

3531868 bp

Protein-coding Genes

3298 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rtx toxinPM04_11420Not AvailableNegative2296895 - 229820847788.5
peptide abc transporter atpasePM04_11425Not AvailableNegative2298205 - 229993562549.5
flagellar motor protein motbPM04_11430Not AvailableNegative2300116 - 230135144457.6
flagellar motor protein pomaPM04_11435Not AvailableNegative2301380 - 230214127207.1
hypothetical proteinPM04_11440Not AvailablePositive2302234 - 230273718469.2
hypothetical proteinPM04_11445Not AvailableNegative2302747 - 23030079075.28
rna polymerase subunit sigma-54PM04_11450Not AvailablePositive2303140 - 230448349490.6
hypothetical proteinPM04_11455Not AvailablePositive2304596 - 230505417061.6
hypothetical proteinPM04_11465Not AvailableNegative2305398 - 230598822172.4
hypothetical proteinPM04_11470Not AvailableNegative2306351 - 23065938806.75

Displaying genes 2281 – 2290 of 3396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.