Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassobacter |
| Species | Thalassobacter sp. 16PALIMAR09 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
712909 bp
Thymine Count
740935 bp
Guanine Count
1065415 bp
Cytosine Count
1012609 bp
Genome Length
3531868 bp
Protein-coding Genes
3298 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase | PM04_08945 | Not Available | Negative | 1797918 - 1798730 | 30415.3 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | PM04_08950 | Not Available | Positive | 1799007 - 1799834 | 29443.1 |
| hypothetical protein | PM04_08955 | Not Available | Positive | 1799923 - 1800657 | 25907.8 |
| hypothetical protein | PM04_08960 | Not Available | Positive | 1800703 - 1801047 | 12393.5 |
| n-formylglutamate amidohydrolase | PM04_08965 | Not Available | Negative | 1801053 - 1801916 | 31719.8 |
| Trna-val | Not Available | Not Available | Positive | 1802041 - 1802115 | Not Available |
| peroxidase | PM04_08975 | Not Available | Negative | 1802450 - 1803103 | 23832.1 |
| aldehyde dehydrogenase | PM04_08980 | Not Available | Positive | 1803218 - 1804651 | 50565.9 |
| nuclease | PM04_08985 | Not Available | Negative | 1804696 - 1805043 | 13188.8 |
| succinyl-diaminopimelate desuccinylase | PM04_08990 | Not Available | Negative | 1805518 - 1806660 | 40853.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
