Gordonia sihwensis NBRC 108236

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia sihwensis NBRC 108236 is a mesophilic bacterium characterized by the presence of flagella, which suggest its motility capabilities. This species thrives optimally at a temperature of 29°C, indicating a preference for moderate environmental conditions. The organism has a single replicon, which is a notable genomic characteristic that may influence its replication and genetic stability. The accession number for Gordonia sihwensis is BANU00000000.1, which provides a reference for genomic information that can be utilized for further study of its genetic makeup and potential applications. The presence of flagella may facilitate movement toward favorable conditions or away from unfavorable environments, highlighting its adaptability. In an ecological context, the motility conferred by flagella could play a significant role in the bacterium's ability to colonize various niches within its environment. Understanding the growth conditions and genetic framework of Gordonia sihwensis can provide insights into its ecological interactions and potential biotechnological applications, particularly in bioremediation processes where mobility and adaptability are advantageous.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia sihwensis
StrainNBRC 108236

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia sihwensis NBRC 108236 DNA, contig: GSI01S64, whole genome

Gene Summary

Adenine Count

661247 bp

Thymine Count

657648 bp

Guanine Count

1415093 bp

Cytosine Count

1406902 bp

Genome Length

4140890 bp

Protein-coding Genes

3791 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative 6-phosphogluconate dehydrogenaseGSI01S_16_00940Not AvailablePositive2489535 - 249050333856.7
dna replication and repair protein recfGSI01S_16_00950Not AvailablePositive2490522 - 249177244479.5
hypothetical proteinGSI01S_16_00960Not AvailablePositive2491765 - 249231619952.8
dna gyrase subunit bGSI01S_16_00970Not AvailablePositive2492501 - 249455574781.9
dna gyrase subunit aGSI01S_16_00980Not AvailablePositive2494647 - 249714591850.4
hypothetical proteinGSI01S_16_00990Not AvailablePositive2497199 - 249811330901.8
Trna-ileNot AvailableNot AvailablePositive2498175 - 2498251Not Available
Trna-alaNot AvailableNot AvailablePositive2498278 - 2498353Not Available
hypothetical proteinGSI01S_16_01000Not AvailablePositive2498472 - 249881312777.0
hypothetical proteinGSI01S_16_01010Not AvailablePositive2498911 - 249948621266.4

Displaying genes 2391 – 2400 of 3968 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0004647(R)-tetraprenyl-beta-curcumeneC35H56Chemical structure of (R)-tetraprenyl-beta-curcumeneNot available
Average476.833Da
Monoisotopic476.438201803Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.