Gordonia sihwensis NBRC 108236

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia sihwensis NBRC 108236 is a mesophilic bacterium characterized by the presence of flagella, which suggest its motility capabilities. This species thrives optimally at a temperature of 29°C, indicating a preference for moderate environmental conditions. The organism has a single replicon, which is a notable genomic characteristic that may influence its replication and genetic stability. The accession number for Gordonia sihwensis is BANU00000000.1, which provides a reference for genomic information that can be utilized for further study of its genetic makeup and potential applications. The presence of flagella may facilitate movement toward favorable conditions or away from unfavorable environments, highlighting its adaptability. In an ecological context, the motility conferred by flagella could play a significant role in the bacterium's ability to colonize various niches within its environment. Understanding the growth conditions and genetic framework of Gordonia sihwensis can provide insights into its ecological interactions and potential biotechnological applications, particularly in bioremediation processes where mobility and adaptability are advantageous.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia sihwensis
StrainNBRC 108236

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia sihwensis NBRC 108236 DNA, contig: GSI01S64, whole genome

Gene Summary

Adenine Count

661247 bp

Thymine Count

657648 bp

Guanine Count

1415093 bp

Cytosine Count

1406902 bp

Genome Length

4140890 bp

Protein-coding Genes

3791 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-on-2 hemoglobinGSI01S_15_00900Not AvailableNegative2326396 - 232678815281.0
hypothetical proteinGSI01S_15_00910Not AvailablePositive2326934 - 23271828888.88
hypothetical proteinGSI01S_15_00920Not AvailablePositive2327184 - 232765115727.8
aminopeptidase nGSI01S_15_00930Not AvailableNegative2327727 - 233030993871.5
hypothetical proteinGSI01S_15_00940Not AvailablePositive2330380 - 233100022825.8
peptidase m48 family proteinGSI01S_15_00950Not AvailableNegative2331015 - 233203736323.9
ribose-5-phosphate isomerase bGSI01S_15_00960Not AvailablePositive2332091 - 233256416730.6
putative dna glycosylaseGSI01S_15_00970Not AvailablePositive2332571 - 233338930589.9
hypothetical proteinGSI01S_15_00980Not AvailablePositive2333470 - 233436031724.7
hypothetical proteinGSI01S_15_00990Not AvailableNegative2334449 - 233514424735.3

Displaying genes 2241 – 2250 of 3968 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0004647(R)-tetraprenyl-beta-curcumeneC35H56Chemical structure of (R)-tetraprenyl-beta-curcumeneNot available
Average476.833Da
Monoisotopic476.438201803Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.