Sphingomonas parapaucimobilis NBRC 15100

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas parapaucimobilis NBRC 15100 is an aerobic, rod-shaped bacterium that possesses flagella, allowing for motility. This organism has a single replicon, indicating a streamlined genetic structure. The accession number for this strain is BBPI00000000.1, which serves as a reference for its genetic and genomic information. As an aerobic bacterium, Sphingomonas parapaucimobilis thrives in environments where oxygen is present, which may influence its ecological niches. The presence of flagella suggests that this species can actively navigate its surroundings, which may enhance its ability to colonize various habitats or compete for resources. In terms of ecological significance, Sphingomonas species, including Sphingomonas parapaucimobilis, are often found in diverse environments, such as soil and water. Their metabolic versatility can contribute to bioremediation processes, as they are capable of degrading complex organic compounds. This trait is particularly important in the context of environmental sustainability, where microbial communities play a crucial role in the breakdown of pollutants. The specific traits of Sphingomonas parapaucimobilis, including its aerobic nature and motility, suggest it may be well-adapted to participate in these ecological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas parapaucimobilis
StrainNBRC 15100

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas parapaucimobilis NBRC 15100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas parapaucimobilis NBRC 15100 DNA, contig: SP5127,

Gene Summary

Adenine Count

670348 bp

Thymine Count

672506 bp

Guanine Count

1323679 bp

Cytosine Count

1327989 bp

Genome Length

3994522 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-mannonate oxidoreductaseSP5_102_00040Not AvailableNegative3862748 - 386412449156.8
uronate isomeraseSP5_102_00050Not AvailableNegative3864121 - 386553352392.0
mannonate dehydrataseSP5_102_00060Not AvailableNegative3865530 - 386669943015.4
2-dehydro-3-deoxygluconokinaseSP5_102_00070Not AvailablePositive3866839 - 386773832343.4
50s ribosomal protein l1SP5_102_00080Not AvailableNegative3868127 - 386881923962.2
50s ribosomal protein l11SP5_102_00090Not AvailableNegative3868824 - 386925514991.3
transcription antitermination protein nusgSP5_102_00100Not AvailableNegative3869580 - 387011619789.8
preprotein translocase sece subunitSP5_102_00110Not AvailableNegative3870127 - 38703247393.37
hypothetical proteinSP5_102_00120Not AvailableNegative3870859 - 38710416891.28
carbon starvation protein aSP5_102_00130Not AvailableNegative3871038 - 387308371664.9

Displaying genes 3651 – 3660 of 3760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.