Sphingomonas parapaucimobilis NBRC 15100

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas parapaucimobilis NBRC 15100 is an aerobic, rod-shaped bacterium that possesses flagella, allowing for motility. This organism has a single replicon, indicating a streamlined genetic structure. The accession number for this strain is BBPI00000000.1, which serves as a reference for its genetic and genomic information. As an aerobic bacterium, Sphingomonas parapaucimobilis thrives in environments where oxygen is present, which may influence its ecological niches. The presence of flagella suggests that this species can actively navigate its surroundings, which may enhance its ability to colonize various habitats or compete for resources. In terms of ecological significance, Sphingomonas species, including Sphingomonas parapaucimobilis, are often found in diverse environments, such as soil and water. Their metabolic versatility can contribute to bioremediation processes, as they are capable of degrading complex organic compounds. This trait is particularly important in the context of environmental sustainability, where microbial communities play a crucial role in the breakdown of pollutants. The specific traits of Sphingomonas parapaucimobilis, including its aerobic nature and motility, suggest it may be well-adapted to participate in these ecological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas parapaucimobilis
StrainNBRC 15100

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas parapaucimobilis NBRC 15100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas parapaucimobilis NBRC 15100 DNA, contig: SP5127,

Gene Summary

Adenine Count

670348 bp

Thymine Count

672506 bp

Guanine Count

1323679 bp

Cytosine Count

1327989 bp

Genome Length

3994522 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative cytosol aminopeptidaseSP5_001_00460Not AvailableNegative42777 - 4424350791.8
putative organic solvent tolerance proteinSP5_001_00470Not AvailablePositive44425 - 4665382988.9
peptidyl-prolyl cis-trans isomerase suraSP5_001_00480Not AvailablePositive46711 - 4809350812.8
4-hydroxythreonine-4-phosphate dehydrogenaseSP5_001_00490Not AvailablePositive48095 - 4909034400.5
ribosomal rna small subunit methyltransferase aSP5_001_00500Not AvailablePositive49092 - 4991629714.3
hypothetical proteinSP5_001_00510Not AvailableNegative50049 - 5055217328.9
putative rna methyltransferaseSP5_001_00520Not AvailableNegative50585 - 5177241131.0
inosine-5'-monophosphate dehydrogenaseSP5_001_00530Not AvailableNegative51791 - 5324851287.9
protein qmcaSP5_001_00540Not AvailablePositive53375 - 5434935644.0
nfed family proteinSP5_001_00550Not AvailablePositive54346 - 5480116041.5

Displaying genes 111 – 120 of 3760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.