Leptospira alstonii serovar Pingchang str. 80-412

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Leptospiria

Order

Leptospirales

Family

Leptospiraceae

Genus

Leptospira

Description

Leptospira alstonii serovar Pingchang str. 80-412 is a species of pathogenic bacteria characterized by the presence of flagella, which contribute to its motility. This organism is classified under the genus Leptospira, known for its spiral-shaped structure and ability to thrive in various environments, particularly in aquatic ecosystems. The strain has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptability. The complete genome of Leptospira alstonii serovar Pingchang str. 80-412 is cataloged under the accession number AOHD00000000.2, which provides a reference for researchers studying this strain's genetic makeup and potential pathogenic mechanisms. The ecological implications of Leptospira alstonii serovar Pingchang str. 80-412 are significant, as members of the Leptospira genus are often found in water and soil environments, where they can interact with various host organisms. Understanding the characteristics of this particular strain, including its motility and genetic structure, is crucial for exploring its role in disease transmission and its ecological niche. The presence of flagella suggests that it may have enhanced mobility in aquatic environments, potentially influencing its interactions with hosts and the environment. This insight emphasizes the importance of studying such strains to ascertain their impact on public health and environmental dynamics.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassLeptospiria
OrderLeptospirales
FamilyLeptospiraceae
GenusLeptospira
SpeciesLeptospira alstonii
Strainserovar Pingchang 80-412

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Leptospira alstonii serovar Pingchang str. 80-412
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leptospira alstonii serovar Pingchang str. 80-412

Gene Summary

Adenine Count

1271707 bp

Thymine Count

1277613 bp

Guanine Count

942738 bp

Cytosine Count

945243 bp

Genome Length

4437303 bp

Protein-coding Genes

4347 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-directed rna polymerase, beta' subunitLEP1GSC193_0895Not AvailableNegative2613899 - 2618113157685.0
dna-directed rna polymerase, beta subunitLEP1GSC193_0896Not AvailableNegative2618117 - 2621797137773.0
ribosomal protein l7/l12LEP1GSC193_0897Not AvailableNegative2622041 - 262235510609.9
ribosomal protein l10LEP1GSC193_0898Not AvailableNegative2622467 - 262300018811.9
ribosomal protein l1LEP1GSC193_0899Not AvailableNegative2623028 - 262372024988.4
ribosomal protein l11LEP1GSC193_0900Not AvailableNegative2623735 - 262416315134.7
transcription termination/antitermination factor nusgLEP1GSC193_0901Not AvailableNegative2624190 - 262473520484.9
preprotein translocase, sece subunitLEP1GSC193_0902Not AvailableNegative2624769 - 26249577360.98
Trna-trpNot AvailableNot AvailablePositive2625008 - 2625078Not Available
Trna-thrNot AvailableNot AvailablePositive2625090 - 2625161Not Available

Displaying genes 2611 – 2620 of 4391 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

13 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002243S-methyl-5'-thioinosineC11H14N4O4SChemical structure of S-methyl-5'-thioinosineNot available
Average298.32Da
Monoisotopic298.0735761Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0002810dTDP-4-amino-4,6-dideoxy-D-glucoseC16H26N3O14P2Chemical structure of dTDP-4-amino-4,6-dideoxy-D-glucoseNot available
Average546.339Da
Monoisotopic546.0895501Da
BASm00030222-methyl-cis-aconitateC7H5O6Chemical structure of 2-methyl-cis-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003537(R)-3-hydroxy-2-oxo-4-phosphooxybutanoateC4H4O8PChemical structure of (R)-3-hydroxy-2-oxo-4-phosphooxybutanoateNot available
Average211.043Da
Monoisotopic210.9660248Da
BASm00036954-phospho-D-erythronateC4H6O8PChemical structure of 4-phospho-D-erythronateNot available
Average213.059Da
Monoisotopic212.9816749Da
BASm0003763(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6PChemical structure of (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateNot available
Average285.1898Da
Monoisotopic285.0402236Da
BASm00037801D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside 3-phosphateC14H24NO14PChemical structure of 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside 3-phosphateNot available
Average461.314Da
Monoisotopic461.094538615Da

Displaying 1–10 of 13 metabolites

Health Effects

No health effects information available for this bacterium.