Bombilactobacillus mellifer str. Bin4

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Bombilactobacillus

Description

Bombilactobacillus mellifer str. Bin4 is a noteworthy bacterial strain characterized by a single replicon, suggesting a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is documented under the accession number JXJQ00000000.1, which facilitates its identification and retrieval from genomic databases for further research. The presence of a single replicon indicates that Bombilactobacillus mellifer str. Bin4 may exhibit a simpler regulatory mechanism compared to bacteria with multiple replicons. This can have implications for its metabolic processes and response to environmental stressors. The reduced complexity may enhance its survival in niche ecosystems, where rapid adaptation is essential. Additionally, the specific characteristics of Bombilactobacillus mellifer str. Bin4 could provide insights into its ecological role, particularly in symbiotic relationships. This strain may interact with other microorganisms or host organisms, potentially influencing microbial community dynamics. Understanding its genomic features and ecological interactions could pave the way for applications in biotechnology or agriculture, particularly in the context of beneficial bacteria in fermentation processes or soil health. In summary, Bombilactobacillus mellifer str. Bin4, with its single replicon and documented accession, represents a unique subject for study, offering potential insights into its ecological roles and applications in various fields.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusBombilactobacillus
SpeciesBombilactobacillus mellifer
StrainBin4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bombilactobacillus mellifer strain Bin4 plasmid pBin4p2 contig028,

Gene Summary

Adenine Count

539931 bp

Thymine Count

544149 bp

Guanine Count

351534 bp

Cytosine Count

350476 bp

Genome Length

1786090 bp

Protein-coding Genes

1592 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
selenocysteine-specific translation elongation factorJG30_01470Q46455Positive152764 - 15466270087.0
cysteine desulfurase family proteinJG30_01480Q9V242Positive154659 - 15581641278.3
l-seryl-trna(sec) selenium transferaseJG30_01490Q8R8W4Positive155819 - 15724051768.9
n-6 adenine-specific dna methylase yitwJG30_01500P70949Positive157218 - 15754112006.8
putative membrane proteinJG30_01510B7F138Positive157591 - 15818121190.2
respiratory-chain nadh dehydrogenase 51 kd subunitJG30_01520D8GR66Positive158268 - 15958146894.8
Trna-sec(p)Not AvailableNot AvailablePositive159903 - 159995Not Available
apc family amino acid-polyamine-organocation transporterJG30_01530Q45577Positive160351 - 16196159343.8
s-ribosylhomocysteine lyaseJG30_01540Q5QHW1Negative162034 - 16250717628.9
nlpa lipoproteinJG30_01550O32167Negative162525 - 16336131050.7

Displaying genes 141 – 150 of 1643 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

97 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da

Displaying 1–10 of 97 metabolites

Health Effects

No health effects information available for this bacterium.