Vannielia litorea

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Vannielia

Description

Vannielia litorea is characterized by having a single replicon, which suggests a streamlined genomic organization. This trait may contribute to its adaptability in various environments. The organism is cataloged under the accession number FSRL00000000.1, indicating its recognition in genomic databases. Understanding Vannielia litorea's genetic structure is essential for exploring its ecological roles and potential applications. The presence of a single replicon may allow for efficient replication and maintenance of its genetic material, potentially enhancing survival in fluctuating conditions. Additionally, the streamlined genome could facilitate the study of its metabolic pathways and interactions within its ecosystem. In summary, Vannielia litorea's singular replicon structure indicates a possible evolutionary adaptation that could influence its biological functions and interactions in its habitat. Further research on this organism may provide insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusVannielia
SpeciesVannielia litorea
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanicola litoreus strain DSM 29440 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3998 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxine 5'-phosphate synthaseSAMN05444002_4066Not AvailableNegative4056075 - 405681827090.4
hypothetical proteinSAMN05444002_4067Not AvailableNegative4056925 - 405759625226.0
gtp pyrophosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseSAMN05444002_4068Not AvailableNegative4057639 - 405975679552.3
dna-directed rna polymerase subunit omegaSAMN05444002_4069Not AvailableNegative4059781 - 406013413260.5
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinaseSAMN05444002_4070Not AvailableNegative4060259 - 406082219897.7
uncharacterized conserved protein, laba/duf88 familySAMN05444002_4071Not AvailablePositive4060960 - 406153522034.4
(2s)-methylsuccinyl-coa dehydrogenaseSAMN05444002_4072Not AvailableNegative4061579 - 406325560318.4
hypothetical proteinSAMN05444002_4073Not AvailablePositive4063408 - 406417226659.5
pas domain s-box-containing proteinSAMN05444002_4074Not AvailablePositive4064304 - 406532036914.1
3-hydroxyisobutyrate dehydrogenaseSAMN05444002_4075Not AvailableNegative4065343 - 406621529294.2

Displaying genes 4031 – 4040 of 4070 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.