Vannielia litorea

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Vannielia

Description

Vannielia litorea is characterized by having a single replicon, which suggests a streamlined genomic organization. This trait may contribute to its adaptability in various environments. The organism is cataloged under the accession number FSRL00000000.1, indicating its recognition in genomic databases. Understanding Vannielia litorea's genetic structure is essential for exploring its ecological roles and potential applications. The presence of a single replicon may allow for efficient replication and maintenance of its genetic material, potentially enhancing survival in fluctuating conditions. Additionally, the streamlined genome could facilitate the study of its metabolic pathways and interactions within its ecosystem. In summary, Vannielia litorea's singular replicon structure indicates a possible evolutionary adaptation that could influence its biological functions and interactions in its habitat. Further research on this organism may provide insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusVannielia
SpeciesVannielia litorea
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanicola litoreus strain DSM 29440 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3998 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative nad(p)h quinone oxidoreductase, pig3 familySAMN05444002_3704Not AvailablePositive3719169 - 372016134344.6
hypothetical proteinSAMN05444002_3705Not AvailablePositive3720158 - 372061917005.8
signal transduction histidine kinaseSAMN05444002_3706Not AvailableNegative3720668 - 372208951830.1
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) componentSAMN05444002_3707Not AvailableNegative3722126 - 372353549599.8
uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domainSAMN05444002_3708Not AvailableNegative3723535 - 372426926077.7
lsu ribosomal protein l34pSAMN05444002_3709Not AvailablePositive3724569 - 37247035137.46
ribonuclease p protein componentSAMN05444002_3710Not AvailablePositive3724733 - 372511613875.9
hypothetical proteinSAMN05444002_3711Not AvailablePositive3725141 - 37254139862.13
uncharacterized conserved protein ygim, contains n-terminal sh3 domain, duf1202 familySAMN05444002_3712Not AvailablePositive3725469 - 372594817798.3
phenylpropionate dioxygenase, large terminal subunitSAMN05444002_3713Not AvailablePositive3726037 - 372718242163.8

Displaying genes 3671 – 3680 of 4070 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.