Vannielia litorea

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Vannielia

Description

Vannielia litorea is characterized by having a single replicon, which suggests a streamlined genomic organization. This trait may contribute to its adaptability in various environments. The organism is cataloged under the accession number FSRL00000000.1, indicating its recognition in genomic databases. Understanding Vannielia litorea's genetic structure is essential for exploring its ecological roles and potential applications. The presence of a single replicon may allow for efficient replication and maintenance of its genetic material, potentially enhancing survival in fluctuating conditions. Additionally, the streamlined genome could facilitate the study of its metabolic pathways and interactions within its ecosystem. In summary, Vannielia litorea's singular replicon structure indicates a possible evolutionary adaptation that could influence its biological functions and interactions in its habitat. Further research on this organism may provide insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusVannielia
SpeciesVannielia litorea
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanicola litoreus strain DSM 29440 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3998 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate epimeraseSAMN05444002_3318Not AvailablePositive3348368 - 334918629000.4
threonylcarbamoyladenosine trna methylthiotransferase mtabSAMN05444002_3319Not AvailablePositive3349179 - 335043545684.0
negative transcriptional regulator, paib familySAMN05444002_3320Not AvailablePositive3350448 - 335106522538.1
glutathione s-transferaseSAMN05444002_3321Not AvailablePositive3351166 - 335178022487.7
lipid a oxidaseSAMN05444002_3322Not AvailableNegative3351823 - 335251525118.2
ubiquinol-cytochrome c reductase iron-sulfur subunitSAMN05444002_3323Not AvailablePositive3352804 - 335336419838.3
ubiquinol-cytochrome c reductase cytochrome b subunitSAMN05444002_3324Not AvailablePositive3353380 - 335470249824.3
ubiquinol-cytochrome c reductase cytochrome c1 subunitSAMN05444002_3325Not AvailablePositive3354717 - 335585040283.3
thiamine transport system atp-binding proteinSAMN05444002_3326Not AvailableNegative3355977 - 335666923892.1
thiamine transport system permease proteinSAMN05444002_3327Not AvailableNegative3356656 - 335820352983.6

Displaying genes 3291 – 3300 of 4070 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.