Vannielia litorea

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Vannielia

Description

Vannielia litorea is characterized by having a single replicon, which suggests a streamlined genomic organization. This trait may contribute to its adaptability in various environments. The organism is cataloged under the accession number FSRL00000000.1, indicating its recognition in genomic databases. Understanding Vannielia litorea's genetic structure is essential for exploring its ecological roles and potential applications. The presence of a single replicon may allow for efficient replication and maintenance of its genetic material, potentially enhancing survival in fluctuating conditions. Additionally, the streamlined genome could facilitate the study of its metabolic pathways and interactions within its ecosystem. In summary, Vannielia litorea's singular replicon structure indicates a possible evolutionary adaptation that could influence its biological functions and interactions in its habitat. Further research on this organism may provide insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusVannielia
SpeciesVannielia litorea
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanicola litoreus strain DSM 29440 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3998 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate abc transporter membrane protein 1, cut1 familySAMN05444002_0179Not AvailablePositive164908 - 16577432310.9
carbohydrate abc transporter membrane protein 2, cut1 familySAMN05444002_0180Not AvailablePositive165825 - 16665530481.6
3-oxoacyl-[acyl-carrier protein] reductaseSAMN05444002_0181Not AvailablePositive166652 - 16741926611.8
carbohydrate abc transporter atp-binding protein, cut1 familySAMN05444002_0182Not AvailablePositive167412 - 16849739326.4
sugar lactone lactonase yvreSAMN05444002_0183Not AvailableNegative168490 - 16935930659.4
transcriptional regulator, gntr familySAMN05444002_0184Not AvailablePositive169458 - 17015926286.3
formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domainSAMN05444002_0185Not AvailablePositive170206 - 17109332391.7
arylsulfatase aSAMN05444002_0186Not AvailableNegative171094 - 17250353210.1
galactonate dehydrataseSAMN05444002_0187Not AvailablePositive172624 - 17383243886.2
peptide/nickel transport system substrate-binding proteinSAMN05444002_0188Not AvailablePositive173862 - 17580872453.9

Displaying genes 211 – 220 of 4070 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.