Pseudomonas putida HB3267

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida HB3267 is a mesophilic, gram-negative bacterium characterized by its rod shape and the presence of flagella, which enables its mobility. This organism is classified as a heterotroph, relying on organic compounds as its energy source, and it exhibits a facultative oxygen requirement, allowing it to thrive in both aerobic and anaerobic environments. Typically found in soil and wastewater habitats, P. putida HB3267 exists as a free-living organism, contributing to the microbial diversity and functionality of these ecosystems. The bacterium possesses two replicons, indicating a complex genetic structure that may facilitate adaptability and resilience in varied environmental conditions. Its double-membrane system is a typical feature of gram-negative bacteria, providing an additional layer of protection and contributing to its overall metabolic capabilities. The ecological role of Pseudomonas putida HB3267 is significant, particularly in the context of bioremediation. Its ability to degrade various organic pollutants in wastewater environments highlights its potential application in environmental biotechnology. This bacterium's metabolic versatility not only aids in nutrient cycling within its habitat but also positions it as a valuable agent for bioremediation efforts aimed at mitigating pollution. Accessions NC_019905.1 and NC_019906.1 provide genomic insights that could further enhance our understanding of its functional capabilities and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainHB3267

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida HB3267
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida HB3267, complete sequence.

Gene Summary

Adenine Count

1105230 bp

Thymine Count

1092397 bp

Guanine Count

1831212 bp

Cytosine Count

1846911 bp

Genome Length

5875750 bp

Protein-coding Genes

5345 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna guanosine(34) transglycosylase tgtB479_RS04735Not AvailablePositive1053410 - 105452541219.9
preprotein translocase subunit yajcB479_RS04740Not AvailablePositive1054568 - 105490311881.6
protein translocase subunit secdB479_RS04745Not AvailablePositive1054968 - 105683067142.0
protein translocase subunit secfB479_RS04750Not AvailablePositive1056841 - 105774932785.2
glycine zipper 2tm domain-containing proteinB479_RS04755Not AvailablePositive1057870 - 105841218556.3
inositol-phosphate phosphataseB479_RS04760Not AvailableNegative1058629 - 105944729808.5
trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmjB479_RS04765Not AvailablePositive1059599 - 106035427456.2
serine o-acetyltransferaseB479_RS04770Not AvailablePositive1060358 - 106114328252.0
fe-s cluster assembly transcriptional regulator iscrB479_RS04775Not AvailablePositive1061323 - 106181417874.4
iscs subfamily cysteine desulfuraseB479_RS04780Not AvailablePositive1061861 - 106307544444.0

Displaying genes 981 – 990 of 5446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.