Pseudomonas putida HB3267

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida HB3267 is a mesophilic, gram-negative bacterium characterized by its rod shape and the presence of flagella, which enables its mobility. This organism is classified as a heterotroph, relying on organic compounds as its energy source, and it exhibits a facultative oxygen requirement, allowing it to thrive in both aerobic and anaerobic environments. Typically found in soil and wastewater habitats, P. putida HB3267 exists as a free-living organism, contributing to the microbial diversity and functionality of these ecosystems. The bacterium possesses two replicons, indicating a complex genetic structure that may facilitate adaptability and resilience in varied environmental conditions. Its double-membrane system is a typical feature of gram-negative bacteria, providing an additional layer of protection and contributing to its overall metabolic capabilities. The ecological role of Pseudomonas putida HB3267 is significant, particularly in the context of bioremediation. Its ability to degrade various organic pollutants in wastewater environments highlights its potential application in environmental biotechnology. This bacterium's metabolic versatility not only aids in nutrient cycling within its habitat but also positions it as a valuable agent for bioremediation efforts aimed at mitigating pollution. Accessions NC_019905.1 and NC_019906.1 provide genomic insights that could further enhance our understanding of its functional capabilities and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainHB3267

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida HB3267
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida HB3267, complete sequence.

Gene Summary

Adenine Count

1105230 bp

Thymine Count

1092397 bp

Guanine Count

1831212 bp

Cytosine Count

1846911 bp

Genome Length

5875750 bp

Protein-coding Genes

5345 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorB479_RS13190Not AvailablePositive2856574 - 285755436538.4
alpha/beta fold hydrolaseB479_RS13195Not AvailablePositive2857767 - 285864831411.4
duf3330 domain-containing proteinB479_RS13200Not AvailablePositive2858815 - 285931418300.8
sh3 domain-containing proteinB479_RS27800Not AvailableNegative2859476 - 286000319123.9
phenylacetic acid degradation operon negative regulatory protein paaxB479_RS13210Not AvailableNegative2861128 - 286205135119.1
phenylacetic acid degradation protein paayB479_RS13215Not AvailableNegative2862129 - 286272821198.6
2,3-dehydroadipyl-coa hydratase paafB479_RS13220Not AvailablePositive2863084 - 286385727238.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paagB479_RS13225Not AvailablePositive2863892 - 286468328661.6
3-hydroxyacyl-coa dehydrogenase paahB479_RS13230Not AvailablePositive2864686 - 286620353103.8
hydroxyphenylacetyl-coa thioesterase paaiB479_RS13235Not AvailablePositive2866196 - 286663615731.8

Displaying genes 2671 – 2680 of 5446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.