Pseudomonas putida S12

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida S12 is a Gram-negative, rod-shaped bacterium that is classified as a heterotroph, deriving its energy from organic compounds. This microorganism is capable of existing in diverse environments, particularly in soil and wastewater habitats. P. putida S12 is facultative, meaning it can thrive in both aerobic and anaerobic conditions, which enhances its adaptability to varying environmental oxygen levels. The bacterium demonstrates mobility, characterized by the presence of flagella, which allows it to move toward favorable conditions and away from harmful environments. P. putida S12 contains two replicons and has a double-membrane structure, typical of Gram-negative bacteria. This organism is free-living, indicating it does not rely on a host organism for survival, which allows it to play significant roles in nutrient cycling and bioremediation processes in its natural habitats. Its mesophilic temperature range further supports its versatility, as it can grow optimally in moderate temperature conditions. In summary, Pseudomonas putida S12 is a versatile and adaptive bacterium that plays a crucial role in soil and wastewater ecosystems. Its ability to utilize various organic compounds and thrive in fluctuating oxygen levels highlights its ecological importance, particularly in bioremediation and soil health maintenance. The organism's mobility and free-living nature suggest that it may contribute to the microbial diversity and functionality within its habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainS12

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida S12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida S12 plasmid pTTS12, complete sequence.

Gene Summary

Adenine Count

120689 bp

Thymine Count

125420 bp

Guanine Count

170588 bp

Cytosine Count

167203 bp

Genome Length

583900 bp

Protein-coding Genes

629 genes

Non-Coding Genes

14 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome-c oxidase, cbb3-type subunit iRPPX_RS01370Not AvailablePositive342541 - 34398353570.1
cytochrome-c oxidase, cbb3-type subunit iiRPPX_RS01375Not AvailablePositive343983 - 34459122652.3
ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperoneRPPX_RS01380Not AvailablePositive344597 - 3447886975.43
cytochrome-c oxidase, cbb3-type subunit iiiRPPX_RS01385Not AvailablePositive344785 - 34576235629.2
cytochrome c oxidase accessory protein ccogRPPX_RS01390Not AvailablePositive346059 - 34747453294.8
fixh family proteinRPPX_RS01395Not AvailablePositive347490 - 34802019496.2
heavy metal translocating p-type atpaseRPPX_RS01400Not AvailablePositive348157 - 35063189195.3
cbb3-type cytochrome oxidase assembly protein ccosRPPX_RS01405Not AvailablePositive350610 - 3508257724.08
sulfite exporter taue/safe family proteinRPPX_RS01410Not AvailablePositive350818 - 35150123854.2
oxygen-independent coproporphyrinogen iii oxidaseRPPX_RS01415Not AvailablePositive351607 - 35298952566.9

Displaying genes 981 – 990 of 5900 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.