Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | S12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
120689 bp
Thymine Count
125420 bp
Guanine Count
170588 bp
Cytosine Count
167203 bp
Genome Length
583900 bp
Protein-coding Genes
629 genes
Non-Coding Genes
14 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | RPPX_RS29395 | Not Available | Positive | 1794869 - 1796223 | 51718.6 |
| oprd family porin | RPPX_RS08010 | Not Available | Negative | 1796322 - 1797641 | 47823.4 |
| tonb-dependent receptor | RPPX_RS08015 | Not Available | Positive | 1798115 - 1800184 | 76372.5 |
| hypothetical protein | RPPX_RS30800 | Not Available | Negative | 1800251 - 1800448 | 7319.96 |
| agmatine deiminase | RPPX_RS08020 | Not Available | Negative | 1800641 - 1801747 | 40810.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | RPPX_RS08025 | Not Available | Positive | 1802025 - 1802570 | 20343.2 |
| atp-binding protein | RPPX_RS08030 | Not Available | Positive | 1802613 - 1804427 | 67453.5 |
| sigma-54-dependent transcriptional regulator | RPPX_RS08035 | Not Available | Positive | 1804424 - 1805830 | 50977.2 |
| yiid c-terminal domain-containing protein | RPPX_RS08040 | Not Available | Positive | 1805830 - 1806285 | 17017.5 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | RPPX_RS08045 | Not Available | Negative | 1806446 - 1807264 | 29041.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






