Pseudomonas putida S12

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida S12 is a Gram-negative, rod-shaped bacterium that is classified as a heterotroph, deriving its energy from organic compounds. This microorganism is capable of existing in diverse environments, particularly in soil and wastewater habitats. P. putida S12 is facultative, meaning it can thrive in both aerobic and anaerobic conditions, which enhances its adaptability to varying environmental oxygen levels. The bacterium demonstrates mobility, characterized by the presence of flagella, which allows it to move toward favorable conditions and away from harmful environments. P. putida S12 contains two replicons and has a double-membrane structure, typical of Gram-negative bacteria. This organism is free-living, indicating it does not rely on a host organism for survival, which allows it to play significant roles in nutrient cycling and bioremediation processes in its natural habitats. Its mesophilic temperature range further supports its versatility, as it can grow optimally in moderate temperature conditions. In summary, Pseudomonas putida S12 is a versatile and adaptive bacterium that plays a crucial role in soil and wastewater ecosystems. Its ability to utilize various organic compounds and thrive in fluctuating oxygen levels highlights its ecological importance, particularly in bioremediation and soil health maintenance. The organism's mobility and free-living nature suggest that it may contribute to the microbial diversity and functionality within its habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainS12

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida S12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida S12 plasmid pTTS12, complete sequence.

Gene Summary

Adenine Count

120689 bp

Thymine Count

125420 bp

Guanine Count

170588 bp

Cytosine Count

167203 bp

Genome Length

583900 bp

Protein-coding Genes

629 genes

Non-Coding Genes

14 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lrp/asnc family transcriptional regulatorRPPX_RS07350Not AvailablePositive1639042 - 163950316683.1
flavin monoamine oxidase family proteinRPPX_RS07355Not AvailablePositive1639843 - 164152562418.1
carbon-nitrogen hydrolase family proteinRPPX_RS07360Not AvailablePositive1641540 - 164233429297.1
pyrroloquinoline quinone biosynthesis protein pqqfRPPX_RS07365Not AvailablePositive1642475 - 164477584205.1
pyrroloquinoline quinone precursor peptide pqqaRPPX_RS29375Not AvailablePositive1644935 - 16450062811.41
pyrroloquinoline quinone biosynthesis protein pqqbRPPX_RS07370Not AvailablePositive1645085 - 164599633333.9
pyrroloquinoline-quinone synthase pqqcRPPX_RS07375Not AvailablePositive1646159 - 164691429076.5
pyrroloquinoline quinone biosynthesis peptide chaperone pqqdRPPX_RS07380Not AvailablePositive1646911 - 164718610314.2
pyrroloquinoline quinone biosynthesis protein pqqeRPPX_RS07385Not AvailablePositive1647158 - 164831843480.9
alpha/beta hydrolase family proteinRPPX_RS07390Not AvailablePositive1648284 - 165010767034.3

Displaying genes 2191 – 2200 of 5900 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.