Porphyromonas gingivalis SJD2

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas gingivalis SJD2 is a Gram-negative, rod-shaped bacterium that thrives in host-associated environments. It is classified as an anaerobe, indicating that it requires an oxygen-free atmosphere for growth. This species is non-motile, lacking flagella, and it possesses a mesophilic temperature range with an optimal growth temperature of 37°C. P. gingivalis SJD2 features a unique cellular structure characterized by two membranes, typical of Gram-negative bacteria, and it has a single replicon. Unlike some bacteria, this organism does not undergo sporulation, which suggests a reliance on specific environmental conditions for survival and reproduction. Ecologically, P. gingivalis SJD2 is noted for its free-living biotic relationship, indicating that it can exist independently without a host but is often associated with host environments, particularly in the oral cavity. This association is significant as P. gingivalis is commonly linked to periodontal disease and impacts the oral microbiome's health. The information regarding its habitat and oxygen requirement suggests that P. gingivalis SJD2 may play a role in the complex interactions within the oral microbiota, potentially influencing health and disease states. Understanding its traits can provide insights into microbial ecology and the mechanisms by which certain bacteria contribute to oral health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas gingivalis
StrainSJD2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Porphyromonas gingivalis SJD2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas gingivalis SJD2 contig99, whole genome shotgun

Gene Summary

Adenine Count

602657 bp

Thymine Count

599540 bp

Guanine Count

563785 bp

Cytosine Count

562868 bp

Genome Length

2328850 bp

Protein-coding Genes

2020 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain amino acid aminotransferaseSJDPG2_08775Not AvailablePositive1947469 - 194848837807.4
phospholipaseSJDPG2_08780Not AvailableNegative1948617 - 195034465122.5
hypothetical proteinSJDPG2_08785Not AvailablePositive1950404 - 19505505471.52
hypothetical proteinSJDPG2_08795Not AvailableNegative1950844 - 19509875427.5
dna-binding proteinSJDPG2_08800Not AvailablePositive1951083 - 19513168784.74
hypothetical proteinSJDPG2_08805Not AvailablePositive1951355 - 195262049093.2
hypothetical proteinSJDPG2_08810Not AvailablePositive1952620 - 195304816287.2
hypothetical proteinSJDPG2_08815Not AvailablePositive1953045 - 195491073282.9
nucleoid-associated protein ndpaSJDPG2_08820Not AvailablePositive1954910 - 195593839021.4
hypothetical proteinSJDPG2_08825Not AvailableNegative1956959 - 195738716908.4

Displaying genes 1751 – 1760 of 2071 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.