Bifidobacterium bifidum LMG 13195 str. JCM 7004

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium bifidum LMG 13195 str. JCM 7004 is a Gram-positive, anaerobic bacterium characterized by its rod shape and lack of mobility, as it does not possess flagella. This species is part of the Bifidobacterium genus, which is commonly found in the gastrointestinal tracts of humans and other mammals, indicating its host-associated habitat. Bifidobacterium bifidum is mesophilic, thriving in moderate temperature ranges, which is typical for many intestinal microbiota that coexist with their hosts. The strain exhibits a free-living biotic relationship, suggesting it can exist independently within its environment, although it is primarily associated with hosts. Importantly, this bacterium is non-sporulating, which means it does not produce spores, a trait that influences its survival and reproduction strategies in the gut microbiome. In terms of genetic organization, Bifidobacterium bifidum LMG 13195 str. JCM 7004 contains a single replicon and a single membrane. The genetic sequence of this strain can be accessed under the accession number AP018131.1, facilitating further research into its genomic characteristics. The presence of Bifidobacterium bifidum in the gut microbiota contributes to the overall health of the host, playing a role in digestion and the maintenance of gut homeostasis. Its ability to thrive in anaerobic conditions and its free-living lifestyle underscore its adaptability within the complex ecosystem of the intestinal microbiome.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium bifidum
StrainLMG 13195 JCM 7004

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium bifidum LMG 13195 str. JCM 7004
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium bifidum DNA, complete genome, strain: JCM 7004.

Gene Summary

Adenine Count

419412 bp

Thymine Count

425678 bp

Guanine Count

709561 bp

Cytosine Count

707015 bp

Genome Length

2261666 bp

Protein-coding Genes

2072 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBBJK_03098Not AvailablePositive2185759 - 21858814268.24
lacto-n-biose phosphorylaseBBJK_03100Not AvailableNegative2185960 - 218821584254.5
hypothetical proteinBBJK_03102Not AvailableNegative2188212 - 21884036661.11
sugar abc transporter permeaseBBJK_03103Not AvailableNegative2188467 - 218941734564.1
binding-protein-dependent transport system inner membrane proteinBBJK_03105Not AvailableNegative2189417 - 219038834852.2
solute binding protein of abc transporter for sugarsBBJK_03106Not AvailableNegative2190565 - 219187246273.7
anthranilate synthase component iBBJK_03108Not AvailableNegative2192365 - 219398158633.4
phosphoribosyl-amp cyclohydrolaseBBJK_03109Not AvailableNegative2193978 - 219440315768.5
imidazole glycerol phosphate synthase subunit hisfBBJK_03111Not AvailableNegative2194476 - 219524927493.8
ribosomal rna large subunit methyltransferase nBBJK_03112Not AvailableNegative2195399 - 219658943289.9

Displaying genes 2091 – 2100 of 2174 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.