Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PPUTUW4_RS04885 | Not Available | Negative | 1121616 - 1122023 | 14859.5 |
| dna polymerase iii subunit chi | PPUTUW4_RS04890 | O68823 | Negative | 1122032 - 1122460 | 16256.3 |
| leucyl aminopeptidase | PPUTUW4_RS04895 | Q3KHM4 | Negative | 1122521 - 1124011 | 52489.6 |
| lps export abc transporter permease lptf | PPUTUW4_RS04900 | P0AFA0 | Positive | 1124440 - 1125558 | 41579.5 |
| lps export abc transporter permease lptg | PPUTUW4_RS04905 | P0ADC7 | Positive | 1125551 - 1126612 | 38463.3 |
| translation elongation factor 4 | PPUTUW4_RS04910 | Q4KHT3 | Positive | 1126784 - 1128583 | 66341.2 |
| signal peptidase i | PPUTUW4_RS04915 | P26844 | Positive | 1128589 - 1129443 | 31818.0 |
| ribonuclease iii | PPUTUW4_RS04920 | Q3KHL9 | Positive | 1129629 - 1130318 | 25432.6 |
| gtpase era | PPUTUW4_RS04925 | Q3KHL8 | Positive | 1130311 - 1131213 | 34024.2 |
| dna repair protein reco | PPUTUW4_RS04930 | Q3KHL7 | Positive | 1131377 - 1132066 | 25170.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




