Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | PPUTUW4_RS04830 | Not Available | Positive | 1109473 - 1110114 | 22710.9 |
| outer membrane protein assembly factor bamb | PPUTUW4_RS04835 | Q9HXJ7 | Positive | 1110107 - 1111258 | 41058.8 |
| ribosome biogenesis gtpase der | PPUTUW4_RS04840 | Q3K7C0 | Positive | 1111499 - 1112971 | 54909.9 |
| pyridoxal phosphate-dependent aminotransferase | PPUTUW4_RS04845 | P77806 | Positive | 1113198 - 1114346 | 42301.5 |
| amidohydrolase | PPUTUW4_RS04850 | P0DP67 | Positive | 1114334 - 1115125 | 29803.1 |
| 2-isopropylmalate synthase | PPUTUW4_RS04855 | Q3K7C3 | Negative | 1115331 - 1117010 | 61886.2 |
| m23 family metallopeptidase | PPUTUW4_RS04865 | P0AFT0 | Negative | 1117471 - 1118292 | 29418.6 |
| exodeoxyribonuclease vii large subunit | PPUTUW4_RS04870 | Q3K7C5 | Negative | 1118296 - 1119675 | 51243.3 |
| lysr family transcriptional regulator | PPUTUW4_RS04875 | P52666 | Negative | 1119718 - 1120608 | 32772.9 |
| sulfite exporter taue/safe family protein | PPUTUW4_RS04880 | Not Available | Positive | 1120709 - 1121476 | 27529.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




