Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone hscb | PPUTUW4_RS04780 | C3K1M2 | Positive | 1100507 - 1101028 | 20124.7 |
| fe-s protein assembly chaperone hsca | PPUTUW4_RS04785 | Q3K7A9 | Positive | 1101080 - 1102942 | 66030.0 |
| isc system 2fe-2s type ferredoxin | PPUTUW4_RS04790 | P44428 | Positive | 1102945 - 1103286 | 12526.8 |
| fe-s cluster assembly protein iscx | PPUTUW4_RS04795 | Q51384 | Positive | 1103301 - 1103501 | 7796.35 |
| nucleoside-diphosphate kinase | PPUTUW4_RS04800 | Q48LZ8 | Positive | 1103590 - 1104015 | 15038.8 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | PPUTUW4_RS04805 | Q3K7B3 | Positive | 1104044 - 1105192 | 42244.9 |
| type iv pilus biogenesis/stability protein pilw | PPUTUW4_RS04810 | Q9HXJ2 | Positive | 1105205 - 1105963 | 28720.2 |
| rodz family helix-turn-helix domain-containing protein | PPUTUW4_RS04815 | B2VE88 | Positive | 1105963 - 1106991 | 35282.8 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | PPUTUW4_RS04820 | Q3K7B6 | Positive | 1106995 - 1108104 | 39760.1 |
| histidine--trna ligase | PPUTUW4_RS04825 | Q3K7B7 | Positive | 1108142 - 1109431 | 47882.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




