Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secd | PPUTUW4_RS04730 | Q9HXI1 | Positive | 1091414 - 1093282 | 67292.5 |
| protein translocase subunit secf | PPUTUW4_RS04735 | Q9HXI2 | Positive | 1093292 - 1094206 | 33162.6 |
| glycine zipper 2tm domain-containing protein | PPUTUW4_RS04740 | P0AB36 | Positive | 1094328 - 1094876 | 18903.6 |
| inositol-phosphate phosphatase | PPUTUW4_RS04745 | Q9HXI4 | Negative | 1095126 - 1095944 | 29749.5 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | PPUTUW4_RS04750 | A0A0H2ZF87 | Positive | 1096091 - 1096861 | 28375.1 |
| serine o-acetyltransferase | PPUTUW4_RS04755 | A8F961 | Positive | 1096864 - 1097640 | 28010.7 |
| fe-s cluster assembly transcriptional regulator iscr | PPUTUW4_RS04760 | O69219 | Positive | 1097918 - 1098409 | 18013.5 |
| iscs subfamily cysteine desulfurase | PPUTUW4_RS04765 | Q3K7A5 | Positive | 1098460 - 1099674 | 44744.4 |
| fe-s cluster assembly scaffold iscu | PPUTUW4_RS04770 | O31270 | Positive | 1099760 - 1100146 | 13800.6 |
| iron-sulfur cluster assembly protein isca | PPUTUW4_RS04775 | B4EZU6 | Positive | 1100175 - 1100498 | 11598.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




