Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 1082202 - 1082278 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1082288 - 1082362 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1082603 - 1085496 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1085667 - 1085782 | Not Available |
| tote conflict system archaeo-eukaryotic primase domain-containing protein | PPUTUW4_RS04700 | Not Available | Negative | 1085882 - 1087729 | 68233.9 |
| hypothetical protein | PPUTUW4_RS04705 | Not Available | Negative | 1088096 - 1088425 | 11928.6 |
| Trna-leu | Not Available | Not Available | Positive | 1088584 - 1088668 | Not Available |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | PPUTUW4_RS04715 | Q4K6S8 | Positive | 1088776 - 1089840 | 38746.4 |
| trna guanosine(34) transglycosylase tgt | PPUTUW4_RS04720 | Q887B0 | Positive | 1089855 - 1090970 | 41157.9 |
| preprotein translocase subunit yajc | PPUTUW4_RS04725 | P0ADZ9 | Positive | 1091014 - 1091349 | 11883.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




