Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase c-terminal domain-containing protein | PPUTUW4_RS04630 | Not Available | Positive | 1068604 - 1070382 | 63924.1 |
| fatty acid--coa ligase | PPUTUW4_RS04635 | Q5SKN9 | Positive | 1070406 - 1072049 | 60768.4 |
| potassium channel family protein | PPUTUW4_RS04640 | Not Available | Positive | 1072326 - 1072667 | 12527.6 |
| formate dehydrogenase subunit delta | PPUTUW4_RS04645 | Not Available | Negative | 1072786 - 1073007 | 8112.68 |
| hypothetical protein | PPUTUW4_RS04650 | Not Available | Positive | 1073262 - 1073756 | 18620.9 |
| formate dehydrogenase subunit delta | PPUTUW4_RS04655 | Not Available | Negative | 1074003 - 1074224 | 8150.73 |
| formate dehydrogenase subunit alpha | PPUTUW4_RS04660 | O34720 | Negative | 1074221 - 1077103 | 105003.0 |
| nadh-quinone oxidoreductase subunit nuof | PPUTUW4_RS04665 | Q46507 | Negative | 1077100 - 1078659 | 54950.0 |
| formate dehydrogenase subunit gamma | PPUTUW4_RS04670 | Not Available | Negative | 1078659 - 1079135 | 17276.8 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1080543 - 1082079 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




