Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | PPUTUW4_RS04525 | Q882K8 | Positive | 1046536 - 1047711 | 42141.4 |
| txe/yoeb family addiction module toxin | PPUTUW4_RS04530 | P0CJ64 | Negative | 1047720 - 1047974 | 10036.0 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | PPUTUW4_RS04535 | P69347 | Negative | 1047971 - 1048225 | 9517.43 |
| hypothetical protein | PPUTUW4_RS04540 | Not Available | Negative | 1048435 - 1048917 | 18364.9 |
| alkaline phosphatase d family protein | PPUTUW4_RS04545 | Not Available | Negative | 1049058 - 1050977 | 72126.7 |
| hypothetical protein | PPUTUW4_RS04550 | Not Available | Positive | 1051103 - 1051729 | 22738.3 |
| hypothetical protein | PPUTUW4_RS04555 | Not Available | Positive | 1051842 - 1052105 | 9159.89 |
| quinone oxidoreductase | PPUTUW4_RS04560 | Not Available | Positive | 1052213 - 1053193 | 34865.9 |
| taud/tfda family dioxygenase | PPUTUW4_RS04565 | P37610 | Positive | 1053207 - 1054055 | 32130.3 |
| 3-keto-5-aminohexanoate cleavage protein | PPUTUW4_RS04570 | B0VHH0 | Positive | 1054157 - 1055209 | 38953.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




