Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-guanidino-2-oxopentanoate decarboxylase | PPUTUW4_RS04480 | Q9HUI8 | Positive | 1036441 - 1038045 | 56746.6 |
| amidohydrolase | PPUTUW4_RS04485 | Not Available | Positive | 1038127 - 1039875 | 64510.4 |
| gtp-binding protein | PPUTUW4_RS04490 | P29937 | Positive | 1039872 - 1040822 | 34644.6 |
| class ii aldolase/adducin family protein | PPUTUW4_RS04495 | Q9A8Z4 | Positive | 1040819 - 1041574 | 28001.6 |
| hamp domain-containing sensor histidine kinase | PPUTUW4_RS04500 | A0QR01 | Negative | 1041687 - 1043207 | 55434.3 |
| response regulator transcription factor | PPUTUW4_RS04505 | P35163 | Negative | 1043204 - 1043923 | 27091.8 |
| glutamine synthetase | PPUTUW4_RS30115 | Not Available | Positive | 1043967 - 1044071 | 3519.26 |
| peptide-methionine (r)-s-oxide reductase msrb | PPUTUW4_RS04510 | B1J4W5 | Positive | 1044223 - 1044741 | 18963.3 |
| peptide-methionine (s)-s-oxide reductase msra | PPUTUW4_RS04515 | Q98DV6 | Positive | 1044786 - 1045493 | 25572.0 |
| lysr family transcriptional regulator | PPUTUW4_RS04520 | Not Available | Negative | 1045528 - 1046433 | 33621.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




