Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taud/tfda family dioxygenase | PPUTUW4_RS04430 | Not Available | Positive | 1025561 - 1026319 | 28371.4 |
| diiron oxygenase | PPUTUW4_RS04435 | Q70KH9 | Positive | 1026387 - 1027346 | 36537.5 |
| n-acyl homoserine lactonase family protein | PPUTUW4_RS04440 | Not Available | Positive | 1027361 - 1028161 | 30213.0 |
| plp-dependent aminotransferase family protein | PPUTUW4_RS04445 | P39389 | Negative | 1028275 - 1029705 | 52645.8 |
| hypothetical protein | PPUTUW4_RS04450 | Not Available | Negative | 1030068 - 1030772 | 25680.9 |
| abc transporter permease | PPUTUW4_RS04455 | Not Available | Negative | 1031073 - 1031900 | 30116.8 |
| abc transporter permease | PPUTUW4_RS04460 | P31135 | Negative | 1031908 - 1032780 | 32160.9 |
| abc transporter substrate-binding protein | PPUTUW4_RS04465 | Not Available | Negative | 1032791 - 1033903 | 41130.6 |
| abc transporter atp-binding protein | PPUTUW4_RS04470 | Not Available | Negative | 1033992 - 1035083 | 39834.1 |
| lysr substrate-binding domain-containing protein | PPUTUW4_RS04475 | P55576 | Negative | 1035384 - 1036289 | 32831.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




