Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | PPUTUW4_RS04280 | Not Available | Positive | 994649 - 995590 | 35055.6 |
| tonb-dependent receptor | PPUTUW4_RS04285 | Not Available | Positive | 995801 - 998230 | 88244.9 |
| helix-turn-helix domain-containing protein | PPUTUW4_RS04290 | Not Available | Negative | 998348 - 999223 | 32595.7 |
| dmt family transporter | PPUTUW4_RS04295 | Not Available | Positive | 999375 - 1000277 | 32398.1 |
| duf2165 domain-containing protein | PPUTUW4_RS04300 | Not Available | Negative | 1000269 - 1000817 | 21096.6 |
| d-glycerate dehydrogenase | PPUTUW4_RS04305 | A8G7S7 | Negative | 1000993 - 1001967 | 35251.5 |
| hypothetical protein | PPUTUW4_RS04310 | Not Available | Positive | 1002181 - 1002438 | 8909.49 |
| hypothetical protein | PPUTUW4_RS04315 | Not Available | Negative | 1002617 - 1002943 | 11609.8 |
| n-acetyltransferase | PPUTUW4_RS04320 | Not Available | Negative | 1003119 - 1003601 | 18456.1 |
| chemotaxis protein chev | PPUTUW4_RS04325 | Not Available | Negative | 1003605 - 1004507 | 32165.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




